Hundreds of resources at your fingertips

ELIXIR Italy offers integrated services to support life sciences research at every level, from high-throughput sequencing and advanced computing to training, data management, and bioinformatics tools.

available services

CONTIGuator

Command-line tool, Web application

A bacterial genomes finishing tool for structural insights on draft genomes.

Sequence analysis

PASTA

Command-line tool, Web application

A web server predictor for amyloid aggregation propensity from protein…

Protein interactions+1

MobiDB

Database portal, Web application, Web API

Database of protein disorder and mobility annotations.

Protein disordered structure+1

BUSCA

Web application

Prediction of protein subcellular localization from sequence.

Computational biology+2

IDP ontology

Ontology

Ontology used to describe disordered regions in intrinsically disordered…

Protein disordered structure

Protein Ensemble Database

Database portal, Web application, Web API

The Protein Ensemble Database (PED) is an open access database for the…

Protein disordered structure+1

Laniakea

Web service, Workbench

Laniakea is a complete software solution to set up a “Galaxy on-demand”…

DeepMito

Command-line tool, Web application

Predictor of protein sub-mitochondrial localization based on deep learning

Protein targeting and localisation

INPS-MD

Predicting the impact of mutations on protein stability from sequence and…

Genetic variationProtein folding+2

DeepSig

Command-line tool, Web application

Prediction of secretory signal peptides in protein sequences

Computational biology+3

Preview not available

UTRSite

Database portal

A collection of functional sequence patterns located in UTR sequences.

Molecular biologyTranscriptomics

Argot 2.5

Web application

Enhanced to quickly process thousands of sequences for functional inference.

Sequence analysis

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COLOMBOS

Web application

Analyzing comprehensive organism-specific cross-platform expression compendia of bacterial organisms.

Functional genomicsModel organisms+2

RAP

Web application

It is a web tool that performs a quite complete and customizable RNA-Seq…

BioinformaticsSequencing+1

REDIportal

Web application

Database of A-to-I (deamination of adenosines to inosines) events that enables…

Gene transcriptsRare diseasesRNA+3

RNA editing database (REDIdb)

Database portal

RNA editing database in organelles.

Molecular biologyTranscriptomics

UTRdb

Database portal

Database of Untranslated regions (UTRs).

Molecular biologyTranscriptomics

UTRSite

Database portal

A collection of functional sequence patterns located in UTR sequences.

Molecular biologyTranscriptomics

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Tap into ELIXIR Italy’s powerful resources: from sequencing and compute to training and data management to accelerate your scientific journey.

15 jun

Next event EMBO Practical Course on Population Genomics: Background and tools

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